Diversity of partial sequence leptin gene (Exon 3) in crossbred cattle compared to GenBank database

نویسندگان

چکیده

Abstract. Ermawati D, Panjono, Bintara S, Hartatik T. 2022. Diversity of partial sequence leptin gene (Exon 3) in crossbred cattle compared to GenBank database. Biodiversitas 23: 5614-5620. Genetic marker method that is often used select Single Polymorphism Nucleotide (SNP). Polymorphisms (SNP) has been found various candidate genes, one which the gene. Leptin a affects reproduction and weight. Therefore, this research aims identify SNP (exon Crossbred by comparison with data. A sample was taken from Klaten Central Java, Indonesia. Afterward, DNA sequencing results were analyzed BioEdit SNP. software for alignment part intron 2, exon 3 3'UTR. The MEGA 11.1.1 program analyze edit genetic distance phylogenetic tree based on result shows nine variations SNPs 3. cattle, Bos taurus, indicus, Hereford, Friesian Holstein Bali, same cluster. HindIII restriction enzyme can be recommended genotyping using PCR RFLP. This provides information so it further association growth reproduction.

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Chapter 1: GenBank: The Nucleotide Sequence Database

The GenBank sequence database is an annotated collection of all publicly available nucleotide sequences and their protein translations. This database is produced at National Center for Biotechnology Information (NCBI) as part of an international collaboration with the European Molecular Biology Laboratory (EMBL) Data Library from the European Bioinformatics Institute (EBI) and the DNA Data Bank...

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1 . GenBank : The Nucleotide Sequence Database

The GenBank sequence database is an annotated collection of all publicly available nucleotide sequences and their protein translations. This database is produced at National Center for Biotechnology Information (NCBI) as part of an international collaboration with the European Molecular Biology Laboratory (EMBL) Data Library from the European Bioinformatics Institute (EBI) and the DNA Data Bank...

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ژورنال

عنوان ژورنال: Biodiversitas

سال: 2022

ISSN: ['1412-033X', '2085-4722']

DOI: https://doi.org/10.13057/biodiv/d231109